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Intron Name: Anas_platyrhynchos_platyrhynchos_14_84494_84815_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

84494 - 84815

Intron Length:

322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

GCTTCCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATGCAC

U12 Branch Point Sequence:

GCAGCTCCAGCC

Flanking Amino Acid:

GRPLSTSPHATAPAPPNSIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

59.9

39.3

Major BPS

-0.1

1.3

58.7

38.1

Major PPT

79.8

0.67

0.8

73.3

31.6

Minor 5ss

32.2

-2

2.9

42.7

37.7

Minor BPS

37.6

-0.9

1.9

40.78

38.9

Associated Gene:

Gene:

AFAP1L1

Ensembl Gene ID:

ENSAPLG00000011997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033199

83218 - 91111

7894

ENSAPLT00000012526

83218 - 91338

8121