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Intron Name: Anas_platyrhynchos_platyrhynchos_14_84916_85393_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

84916 - 85393

Intron Length:

478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAGGTACC

5'SS Class:

major

3'SS Sequence:

TGCTCTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

CTTGGGGTGACA

Flanking Amino Acid:

TRMNGEQKNSYNDSDAMSSS

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.2

63.1

41.5

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

81.7

0.71

0.8

37.3

Minor 5ss

38.5

-1.3

3.1

56.2

41.1

Minor BPS

36.9

-1

2.8

53.22

45.8

Associated Gene:

Gene:

AFAP1L1

Ensembl Gene ID:

ENSAPLG00000011997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033199

83218 - 91111

7894

ENSAPLT00000012526

83218 - 91338

8121