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Intron Name: Anas_platyrhynchos_platyrhynchos_14_85606_85966_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85606 - 85966

Intron Length:

361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCCCA

5'SS Class:

major

3'SS Sequence:

TTGCTTCTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAA

U12 Branch Point Sequence:

AGAGGCTGAACC

Flanking Amino Acid:

LTIIRDGKLLCYKSSKDRQP

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

60.3

40.2

Major BPS

49.7

-0

1.3

43.1

41.8

Major PPT

80.5

0.69

0.8

73.1

37.3

Minor 5ss

32.9

-2

36.8

41.4

Minor BPS

46.9

-0.2

55.53

42.2

Associated Gene:

Gene:

AFAP1L1

Ensembl Gene ID:

ENSAPLG00000011997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033199

83218 - 91111

7894

ENSAPLT00000012526

83218 - 91338

8121