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Intron Name: Anas_platyrhynchos_platyrhynchos_14_8563971_8565240_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8563971 - 8565240

Intron Length:

1270

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCGAGAAAG

5'SS Class:

major

3'SS Sequence:

GACGAGGCCTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TTACTGCTCACA

Flanking Amino Acid:

AQHFQCLDFQELTLFQICSF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.2

59.2

45.4

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

41.3

-0.5

1.6

34.9

40.6

Minor 5ss

16.6

-3.9

3.2

14.2

28.1

Minor BPS

40.3

-0.7

2.5

57.88

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023824

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039852

8562594 - 8565346

2753