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Intron Name: Anas_platyrhynchos_platyrhynchos_14_8597714_8598447_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
8597714 - 8598447

Intron Length:
734

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTGAGTGAC

5'SS Class:
strong_major

3'SS Sequence:
GTGCCCCTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GCATCAT

U12 Branch Point Sequence:
GTGGCATCATCC

Flanking Amino Acid:
KRDSFIGTPYWMAPEVVMCE

Intron Amino Acid Position:
198

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.7
0.79
0.9
73.6
30.3

Major BPS
57.9
0.2
1.4
62
44.2

Major PPT
73.3
0.53
0.9
65.8
35.9

Minor 5ss
27.7
-2.6
3
31.2
36.9

Minor BPS
42.7
-0.5
2
52.61
44.4

Associated Gene:

Gene:
STK10

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8593507 - 8612332
18826

8567999 - 8612332
44334