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Intron Name: Anas_platyrhynchos_platyrhynchos_14_8612083_8612191_F


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8612083 - 8612191

Intron Length:
109

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATGGCCT

5'SS Class:
strong_major

3'SS Sequence:
CCTTCTGCTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AACACAT

U12 Branch Point Sequence:
GTTCCCTTCTGC

Flanking Amino Acid:
WRDKLRPRKKALEDELNQKK

Intron Amino Acid Position:
927

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.9
0.73
1
68.7
41.8

Major BPS
61.1
0.28
1
67
29.8

Major PPT
79.4
0.66
0.8
76.5
32.1

Minor 5ss
39.5
-1.2
3.3
57
47.3

Minor BPS
37.7
-0.9
3.6
60.42
44.6

Associated Gene:

Gene:
STK10

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8567999 - 8612332
44334

8593507 - 8612332
18826

8606110 - 8612332
6223