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Intron Name: Anas_platyrhynchos_platyrhynchos_14_8653427_8678378_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8653427 - 8678378

Intron Length:

24952

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCATGGCAG

5'SS Class:

major

3'SS Sequence:

TTCCTGTGGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTGTAT

U12 Branch Point Sequence:

TTTTCCTGCATG

Flanking Amino Acid:

EGSSNKPCWFCKPAVPIPLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.2

51.1

45.6

Major BPS

50.1

1.4

51.4

43.9

Major PPT

66.2

0.37

1.1

60.7

44.7

Minor 5ss

-2.8

4.1

34.3

43.1

Minor BPS

59.7

0.16

72.16

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003849

8621046 - 8690486

69441