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Intron Name: Anas_platyrhynchos_platyrhynchos_14_8678456_8684520_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8678456 - 8684520

Intron Length:

6065

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GGGTTCTTGTCC

Flanking Amino Acid:

FREPIGKKKSGADSASVDPL

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

77.1

37.8

Major BPS

66.3

0.4

1.1

41.8

Major PPT

73.4

0.53

0.9

68.1

Minor 5ss

42.2

-0.9

2.9

56.1

42.2

Minor BPS

42.4

-0.6

3.4

58.4

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003849

8621046 - 8690486

69441