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Intron Name: Anas_platyrhynchos_platyrhynchos_14_8686214_8687960_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8686214 - 8687960

Intron Length:

1747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

TCTTAGTAAAAC

Flanking Amino Acid:

QDDFSMQPDEEEKYTVIYPY

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

89.1

0.88

0.6

84.2

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

43.7

-0.5

2.5

60.19

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003849

8621046 - 8690486

69441