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Intron Name: Anas_platyrhynchos_platyrhynchos_14_8706761_8729641_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
8706761 - 8729641

Intron Length:
22881

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCGCCG

5'SS Class:
major

3'SS Sequence:
TTCTCTCCCGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CCCTCAT

U12 Branch Point Sequence:
GAGCCCTCATGC

Flanking Amino Acid:
MGNTVHKTLPDTSHQTRSVS

Intron Amino Acid Position:
11

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.3
0.31
1.3
49
47.1

Major BPS
70
0.5
1.1
71.2
35.2

Major PPT
81.6
0.71
0.7
77.1
24.9

Minor 5ss
35.5
-1.6
3.4
48.5
47.2

Minor BPS
41.9
-0.6
2
46.31
42

Associated Gene:

Gene:
NEURL1B

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8701060 - 8729672
28613