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Intron Name: Anas_platyrhynchos_platyrhynchos_14_87253_87381_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87253 - 87381

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATGGCCC

5'SS Class:

major

3'SS Sequence:

CTCCCCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

GCGTGGCTATCA

Flanking Amino Acid:

PMARREPCEHGKGKKSGLAD

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

54.4

42.8

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

78.2

0.63

0.8

68.8

31.6

Minor 5ss

38.6

-1.3

3.2

52.2

44.6

Minor BPS

34.9

-1.1

2.5

44.06

44.4

Associated Gene:

Gene:

AFAP1L1

Ensembl Gene ID:

ENSAPLG00000011997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012526

83218 - 91338

8121

ENSAPLT00000033199

83218 - 91111

7894