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Intron Name: Anas_platyrhynchos_platyrhynchos_14_88014_88189_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88014 - 88189

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACACAA

U12 Branch Point Sequence:

ATGTCCCCAGGC

Flanking Amino Acid:

RNGQEVTTLEASCSEDLGRW

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

42.7

Major BPS

47.2

-0.1

1.1

52.9

34.1

Major PPT

82.4

0.73

0.7

76.8

25.2

Minor 5ss

37.8

-1.4

46.8

48.5

Minor BPS

41.4

-0.6

2.2

53.92

43.6

Associated Gene:

Gene:

AFAP1L1

Ensembl Gene ID:

ENSAPLG00000011997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012526

83218 - 91338

8121

ENSAPLT00000033199

83218 - 91111

7894