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Intron Name: Anas_platyrhynchos_platyrhynchos_14_88336_88679_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88336 - 88679

Intron Length:

344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGGCTG

5'SS Class:

major

3'SS Sequence:

CCTCCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTGAAA

U12 Branch Point Sequence:

TGGCAAATACCT

Flanking Amino Acid:

NIMTAVRHSYLWASSSQDSR

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.41

1.2

57.7

46.6

Major BPS

53.1

0.08

1.4

65.3

38.6

Major PPT

79.1

0.65

0.7

72.8

25.4

Minor 5ss

37.3

-1.4

3.5

57.5

46.6

Minor BPS

39.7

-0.7

2.1

57.87

43.9

Associated Gene:

Gene:

AFAP1L1

Ensembl Gene ID:

ENSAPLG00000011997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033199

83218 - 91111

7894

ENSAPLT00000012526

83218 - 91338

8121