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Intron Name: Anas_platyrhynchos_platyrhynchos_14_88759_88886_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88759 - 88886

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

ATCCCCACTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAG

U12 Branch Point Sequence:

GCTCTCCTATCC

Flanking Amino Acid:

YDDVPYEKVQIQEELGRPSG

Intron Amino Acid Position:

505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.8

43.8

Major BPS

58.3

0.21

1.7

71.4

45.1

Major PPT

70.7

0.47

0.9

63.2

32.1

Minor 5ss

33.3

-1.9

2.8

39.7

45.9

Minor BPS

46.4

-0.2

1.9

56.93

41.4

Associated Gene:

Gene:

AFAP1L1

Ensembl Gene ID:

ENSAPLG00000011997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033199

83218 - 91111

7894

ENSAPLT00000012526

83218 - 91338

8121