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Intron Name: Anas_platyrhynchos_platyrhynchos_14_89002_89216_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

89002 - 89216

Intron Length:

215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TTTGTACATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTACAT

U12 Branch Point Sequence:

TCGTCCTGACAG

Flanking Amino Acid:

PQVKVKRHASNANQYRYGKN

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

56.9

42.6

Major BPS

67.6

0.44

1.2

Major PPT

0.61

71.2

38.9

Minor 5ss

27.9

-2.5

27.6

37.5

Minor BPS

47.5

-0.3

1.9

53.26

47.1

Associated Gene:

Gene:

AFAP1L1

Ensembl Gene ID:

ENSAPLG00000011997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033199

83218 - 91111

7894

ENSAPLT00000012526

83218 - 91338

8121