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Intron Name: Anas_platyrhynchos_platyrhynchos_14_8952879_8957113_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
8952879 - 8957113

Intron Length:
4235

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCAGCA

5'SS Class:
major

3'SS Sequence:
TGCGTTATTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATATAAA

U12 Branch Point Sequence:
ATTATATAAACA

Flanking Amino Acid:
DDISDTFSEPGYENDSVEDL

Intron Amino Acid Position:
363

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.3
0.41
1.2
59.8
39.5

Major BPS
69.8
0.49
1
70.3
31.8

Major PPT
72.9
0.52
0.9
70.3
40.1

Minor 5ss
35.2
-1.7
3.5
48.6
47

Minor BPS
49.9
-0
1.9
67.41
38.7

Associated Gene:

Gene:
CREBRF

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8949835 - 8960379
10545

8949835 - 8961379
11545