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Intron Name: Anas_platyrhynchos_platyrhynchos_14_8990311_8990995_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8990311 - 8990995

Intron Length:

685

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGCG

5'SS Class:

major

3'SS Sequence:

TAATTTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTTTCTTCACCT

Flanking Amino Acid:

SAKDPKADKKELCSLHKSLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

63.8

40.7

Major BPS

81.8

0.79

1.1

34.5

Major PPT

80.1

0.68

0.9

74.4

35.8

Minor 5ss

28.9

-2.4

3.5

38.5

46.7

Minor BPS

66.5

0.6

1.8

87.98

37.6

Associated Gene:

Gene:

NKX2-5

Ensembl Gene ID:

ENSAPLG00000027109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036194

8988982 - 8991275

2294