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Intron Name: Anas_platyrhynchos_platyrhynchos_14_920792_922183_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
920792 - 922183

Intron Length:
1392

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGA|GTAAGTTAA

5'SS Class:
major

3'SS Sequence:
TTCTTTCCTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATATCAT

U12 Branch Point Sequence:
GCATGCTGAAAA

Flanking Amino Acid:
PYANTGKNPDEVGYAGDNFV

Intron Amino Acid Position:
303

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.2
0.64
1
73.9
32.9

Major BPS
79.4
0.73
1
80.1
32

Major PPT
89.3
0.88
0.6
85
22.7

Minor 5ss
40.8
-1
2.8
45.6
43.6

Minor BPS
46.8
-0.2
2
55.42
42.8

Associated Gene:

Gene:
SLU7

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

917262 - 927759
10498

917262 - 927759
10498