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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9235111_9245024_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9235111 - 9245024

Intron Length:

9914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TATTTGCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTTTCCTAAACT

Flanking Amino Acid:

NRADNIFPFQDRTRTFDMHS

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.6

12.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.6

0.76

0.9

77.5

36.5

Minor 5ss

36.2

-1.6

2.9

50.6

45.9

Minor BPS

78.8

0.98

1.6

92.9

35.6

Associated Gene:

Gene:

CPEB4

Ensembl Gene ID:

ENSAPLG00000022911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035613

9233355 - 9271522

38168