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Intron Name: Anas_platyrhynchos_platyrhynchos_14_929919_930725_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
929919 - 930725

Intron Length:
807

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGAGTT

5'SS Class:
strong_major

3'SS Sequence:
CTTTCCCAAATAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTACTAT

U12 Branch Point Sequence:
CTTTCCCAAATA

Flanking Amino Acid:
IENMFCYDPGDFENFDLPEE

Intron Amino Acid Position:
119

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.5
1.02
0.7
88
25.3

Major BPS
62.1
0.3
1.4
61.1
45

Major PPT
67.1
0.38
0.9
63.4
31.8

Minor 5ss
36.4
-1.5
3.6
55.7
48.5

Minor BPS
55.4
0.17
2
71.63
41

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

928833 - 931303
2471