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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9516673_9517915_F

Intron Information:

Intron Rank:

143349

Intron Class:

major

Intron Phase:

Intron Coordinates:

9516673 - 9517915

Intron Length:

1243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

GGTTCCTTGATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.9

31.6

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

79.8

0.67

0.8

76.2

32.4

Minor 5ss

33.9

-1.8

2.9

40.8

39.5

Minor BPS

70.7

0.51

1.3

68.23

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017386

9515641 - 9518511

2871