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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9535838_9538656_R

Intron Information:

Intron Rank:

137276

Intron Class:

major

Intron Phase:

Intron Coordinates:

9535838 - 9538656

Intron Length:

2819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGCAAG

5'SS Class:

major

3'SS Sequence:

TATGTATTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATTAT

U12 Branch Point Sequence:

TATTATGTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.3

68.8

43.8

Major BPS

72.4

0.56

1.1

63.7

42.3

Major PPT

80.3

0.68

0.9

73.3

40.8

Minor 5ss

34.1

-1.8

2.7

39.7

45.9

Minor BPS

45.6

-0.2

2.3

69.6

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040389

9534302 - 9542848

8547