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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9587859_9592781_R

Intron Information:

Intron Rank:

140115

Intron Class:

major

Intron Phase:

Intron Coordinates:

9587859 - 9592781

Intron Length:

4923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACAAAAA

U12 Branch Point Sequence:

TGTGACAAAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

77.5

33.5

Major BPS

-0.2

47.6

31.1

Major PPT

90.9

0.92

0.7

88.9

28.1

Minor 5ss

-1.5

2.9

42.4

44.3

Minor BPS

39.8

-0.9

2.1

47.5

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022763

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026648

9581074 - 9593562

12489