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Intron Name: Anas_platyrhynchos_platyrhynchos_14_961649_964709_F

Intron Information:

Intron Rank:

131237

Intron Class:

major

Intron Phase:

Intron Coordinates:

961649 - 964709

Intron Length:

3061

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCACAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGGAA

U12 Branch Point Sequence:

TTTTTTGGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

84.1

26.5

Major BPS

62.2

0.3

1.4

63.4

44.3

Major PPT

0.34

0.9

60.2

35.4

Minor 5ss

30.9

-2.2

3.5

46.6

48.7

Minor BPS

49.1

0.01

2.2

77.37

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042136

960682 - 965107

4426