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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9617177_9620750_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9617177 - 9620750

Intron Length:

3574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

TCCTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

TTTGTGGTAACC

Flanking Amino Acid:

QEAGRYSPPPRHLSPTACTL

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

0.9

69.4

35.6

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

85.7

0.8

0.7

80.4

24.9

Minor 5ss

29.3

-2.4

3.1

34.7

35.3

Minor BPS

46.5

-0.2

2.6

69.02

43.1

Associated Gene:

Gene:

MSX2

Ensembl Gene ID:

ENSAPLG00000014116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014709

9616600 - 9621515

4916