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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9903871_9906145_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9903871 - 9906145

Intron Length:

2275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

GTTTTCAAAAAT

Flanking Amino Acid:

TITGCMMTFYRTTPAVVFWQ

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

79.4

0.66

78.7

33.6

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

49.5

0.04

74.72

41.6

Associated Gene:

Gene:

SFXN1

Ensembl Gene ID:

ENSAPLG00000009192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009618

9891782 - 9917475

25694