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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9909835_9910509_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9909835 - 9910509

Intron Length:

675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

TCTTAATTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTTTTTAATC

Flanking Amino Acid:

SRILMAAPGMAIPPFIMNTL

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

75.2

35.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.4

0.75

0.8

77.4

35.5

Minor 5ss

33.6

-1.9

3.5

46.2

Minor BPS

76.7

0.82

78.69

30.3

Associated Gene:

Gene:

SFXN1

Ensembl Gene ID:

ENSAPLG00000009192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009618

9891782 - 9917475

25694