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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9915037_9915720_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9915037 - 9915720

Intron Length:

684

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTCTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

ATATAGTAAACC

Flanking Amino Acid:

APIQVGLVGFCLVFATPLCC

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.2

28.9

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

0.77

0.8

77.9

36.6

Minor 5ss

29.1

-2.4

3.2

36.8

41.9

Minor BPS

45.9

-0.3

2.4

62.63

42.5

Associated Gene:

Gene:

SFXN1

Ensembl Gene ID:

ENSAPLG00000009192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009618

9891782 - 9917475

25694