Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_9925480_9925733_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9925480 - 9925733

Intron Length:

254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

GATTTGTGGACT

Flanking Amino Acid:

VAKFSAIASQLVQAPPTKVG

Intron Amino Acid Position:

514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.9

1.13

0.6

92.3

16.1

Major BPS

76.8

0.67

40.9

Major PPT

91.3

0.93

0.6

89.3

19.5

Minor 5ss

-1.7

2.7

41.8

44.8

Minor BPS

47.6

-0.1

2.2

69.08

41.7

Associated Gene:

Gene:

KIF20A

Ensembl Gene ID:

ENSAPLG00000009529

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009966

9917530 - 9930738

13209