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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9926775_9926862_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
9926775 - 9926862

Intron Length:
88

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTCTGGGAT

5'SS Class:
major

3'SS Sequence:
TTTTTCTTTACAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTTCTTTACA

Flanking Amino Acid:
STHMNQNSSRSHSVFSIRIL

Intron Amino Acid Position:
386

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.9
0.42
1.3
65.7
40.1

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
96.1
1.04
0.5
91.7
19.5

Minor 5ss
32.4
-2
3.5
46.4
49

Minor BPS
77.1
0.85
1.5
87.01
30.8

Associated Gene:

Gene:
KIF20A

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9917530 - 9930738
13209