Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_9927290_9927987_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9927290 - 9927987

Intron Length:

698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

CCCTCCTGCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATCAT

U12 Branch Point Sequence:

AAGGCTGCAATC

Flanking Amino Acid:

TSHSDITQTEELGPRWAELD

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

86.2

29.3

Major BPS

68.1

0.45

1.1

69.7

35.6

Major PPT

69.8

0.45

0.9

67.8

32.2

Minor 5ss

44.5

-0.6

2.5

60.9

43.5

Minor BPS

40.6

-0.7

2.1

45.4

37.7

Associated Gene:

Gene:

KIF20A

Ensembl Gene ID:

ENSAPLG00000009529

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009966

9917530 - 9930738

13209