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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9929993_9930728_R


Intron Information:

Intron Rank:
1

Intron Class:
major-like

Intron Phase:
1

Intron Coordinates:
9929993 - 9930728

Intron Length:
736

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
AGG|GCTCGGTGG

5'SS Class:
weak_major

3'SS Sequence:
GCCATGGCGCAAG|C

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
TCGGCAC

U12 Branch Point Sequence:
CTCTCCGCAGCG

Flanking Amino Acid:
MDQALASPGLFSD

Intron Amino Acid Position:
4

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
57.4
0.18
1.4
42.2
44.7

Major BPS
45
-0.3
1.5
51
44.3

Major PPT
46
-0.2
1.2
36.6
39.7

Minor 5ss
20.7
-3.4
3.8
21.3
37.6

Minor BPS
42.5
-0.7
2.4
51.08
48.9

Associated Gene:

Gene:
KIF20A

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9917530 - 9930738
13209