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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9930793_9931376_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9930793 - 9931376

Intron Length:

584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGGTC

5'SS Class:

strong_major

3'SS Sequence:

GATTCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAT

U12 Branch Point Sequence:

CTCTCCTGCATC

Flanking Amino Acid:

SSVMRSGDQNWVSVSRAIKP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

74.2

36.3

Major BPS

63.5

0.34

1.4

57.1

49.4

Major PPT

77.4

0.62

0.9

70.4

35.9

Minor 5ss

33.9

-1.8

3.7

46.6

43.5

Minor BPS

-0

1.9

62.53

43.6

Associated Gene:

Gene:

BRD8

Ensembl Gene ID:

ENSAPLG00000009994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026056

9929759 - 9955976

26218

ENSAPLT00000043015

9929759 - 9945283

15525

ENSAPLT00000025524

9929759 - 9955976

26218

ENSAPLT00000036943

9929759 - 9955976

26218

ENSAPLT00000022342

9930363 - 9945049

14687

ENSAPLT00000033715

9930363 - 9950466

20104

ENSAPLT00000010483

9930363 - 9955976

25614

ENSAPLT00000029163

9929759 - 9946558

16800

ENSAPLT00000048057

9930363 - 9946558

16196