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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9933337_9933492_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9933337 - 9933492

Intron Length:

156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAAGAA

U12 Branch Point Sequence:

TGTTCAGTGATA

Flanking Amino Acid:

KIIKETQEKYRQLKKDAELI

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

68.4

36.9

Major BPS

49.7

-0

47.1

36.1

Major PPT

86.2

0.82

0.8

80.1

Minor 5ss

33.7

-1.9

3.1

43.4

44.3

Minor BPS

48.6

-0.1

2.3

68.16

38.2

Associated Gene:

Gene:

BRD8

Ensembl Gene ID:

ENSAPLG00000009994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026056

9929759 - 9955976

26218

ENSAPLT00000043015

9929759 - 9945283

15525

ENSAPLT00000025524

9929759 - 9955976

26218

ENSAPLT00000036943

9929759 - 9955976

26218

ENSAPLT00000022342

9930363 - 9945049

14687

ENSAPLT00000033715

9930363 - 9950466

20104

ENSAPLT00000010483

9930363 - 9955976

25614

ENSAPLT00000029163

9929759 - 9946558

16800

ENSAPLT00000048057

9930363 - 9946558

16196