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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9934107_9934598_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9934107 - 9934598

Intron Length:

492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCTGG

5'SS Class:

major

3'SS Sequence:

TGTTCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCCCAC

U12 Branch Point Sequence:

GAGTCGTGGAAT

Flanking Amino Acid:

KRKATDAAYQARQAIKNPPR

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

60.6

46.7

Major BPS

53.6

0.09

1.2

64.1

33.9

Major PPT

85.7

0.8

77.4

36.9

Minor 5ss

42.8

-0.8

2.9

47.3

48.1

Minor BPS

43.2

-0.4

2.2

58.69

Associated Gene:

Gene:

BRD8

Ensembl Gene ID:

ENSAPLG00000009994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026056

9929759 - 9955976

26218

ENSAPLT00000043015

9929759 - 9945283

15525

ENSAPLT00000025524

9929759 - 9955976

26218

ENSAPLT00000036943

9929759 - 9955976

26218

ENSAPLT00000022342

9930363 - 9945049

14687

ENSAPLT00000033715

9930363 - 9950466

20104

ENSAPLT00000010483

9930363 - 9955976

25614

ENSAPLT00000029163

9929759 - 9946558

16800

ENSAPLT00000048057

9930363 - 9946558

16196