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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9934736_9936633_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9934736 - 9936633

Intron Length:

1898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGTAT

U12 Branch Point Sequence:

TCTCCAGGAACT

Flanking Amino Acid:

QPAVDEASPGVGENEMAVAS

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

80.8

33.7

Major BPS

62.7

0.32

1.4

63.4

Major PPT

0.58

0.9

72.5

32.1

Minor 5ss

36.6

-1.5

41.3

44.8

Minor BPS

46.4

-0.2

2.3

71.74

44.5

Associated Gene:

Gene:

BRD8

Ensembl Gene ID:

ENSAPLG00000009994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026056

9929759 - 9955976

26218