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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9938878_9939368_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9938878 - 9939368

Intron Length:

491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAGG

5'SS Class:

major

3'SS Sequence:

TTTGACAATAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTGTTTTGACA

Flanking Amino Acid:

GNIIAIIEDKVDDNPEVLDA

Intron Amino Acid Position:

522

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

66.7

44.4

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

0.2

1.2

57.8

41.3

Minor 5ss

-2.2

3.2

39.7

45.9

Minor BPS

68.4

0.57

1.3

77.15

33.9

Associated Gene:

Gene:

BRD8

Ensembl Gene ID:

ENSAPLG00000009994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026056

9929759 - 9955976

26218

ENSAPLT00000043015

9929759 - 9945283

15525

ENSAPLT00000025524

9929759 - 9955976

26218

ENSAPLT00000036943

9929759 - 9955976

26218

ENSAPLT00000022342

9930363 - 9945049

14687

ENSAPLT00000033715

9930363 - 9950466

20104

ENSAPLT00000010483

9930363 - 9955976

25614

ENSAPLT00000029163

9929759 - 9946558

16800

ENSAPLT00000048057

9930363 - 9946558

16196