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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9940271_9940485_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9940271 - 9940485

Intron Length:

215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATAAC

U12 Branch Point Sequence:

AGAATCATAACC

Flanking Amino Acid:

ADVQHKFELSDSMKEEARAL

Intron Amino Acid Position:

705

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

80.2

30.6

Major BPS

65.3

0.38

1.1

66.2

36.5

Major PPT

80.9

0.7

75.7

26.5

Minor 5ss

45.1

-0.5

2.6

58.1

46.5

Minor BPS

51.4

0.02

1.6

60.42

37.7

Associated Gene:

Gene:

BRD8

Ensembl Gene ID:

ENSAPLG00000009994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025524

9929759 - 9955976

26218

ENSAPLT00000036943

9929759 - 9955976

26218

ENSAPLT00000022342

9930363 - 9945049

14687

ENSAPLT00000033715

9930363 - 9950466

20104

ENSAPLT00000010483

9930363 - 9955976

25614

ENSAPLT00000029163

9929759 - 9946558

16800

ENSAPLT00000048057

9930363 - 9946558

16196

ENSAPLT00000026056

9929759 - 9955976

26218

ENSAPLT00000043015

9929759 - 9945283

15525