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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9941521_9941741_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9941521 - 9941741

Intron Length:

221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTAGAT

U12 Branch Point Sequence:

ATTCAGTAGATT

Flanking Amino Acid:

MLVWRAAANHRYANVFLQPV

Intron Amino Acid Position:

823

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.7

83.9

30.3

Major BPS

55.2

0.13

1.2

52.5

43.3

Major PPT

89.7

0.89

0.6

85.1

22.4

Minor 5ss

38.4

-1.3

2.9

48.7

47.5

Minor BPS

41.5

-0.5

2.4

63.51

Associated Gene:

Gene:

BRD8

Ensembl Gene ID:

ENSAPLG00000009994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026056

9929759 - 9955976

26218

ENSAPLT00000043015

9929759 - 9945283

15525

ENSAPLT00000025524

9929759 - 9955976

26218

ENSAPLT00000036943

9929759 - 9955976

26218

ENSAPLT00000022342

9930363 - 9945049

14687

ENSAPLT00000033715

9930363 - 9950466

20104

ENSAPLT00000010483

9930363 - 9955976

25614

ENSAPLT00000029163

9929759 - 9946558

16800

ENSAPLT00000048057

9930363 - 9946558

16196