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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9941811_9942504_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9941811 - 9942504

Intron Length:

694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTTCATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATGCAT

U12 Branch Point Sequence:

ATTTCTTTCATA

Flanking Amino Acid:

IAPGYHSIVQRPMDLSTIKK

Intron Amino Acid Position:

846

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

81.3

32.8

Major BPS

58.4

0.21

1.3

69.4

37.7

Major PPT

0.7

76.8

31.2

Minor 5ss

33.3

-1.9

43.8

43.9

Minor BPS

66.4

0.51

1.7

77.18

34.1

Associated Gene:

Gene:

BRD8

Ensembl Gene ID:

ENSAPLG00000009994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026056

9929759 - 9955976

26218

ENSAPLT00000043015

9929759 - 9945283

15525

ENSAPLT00000025524

9929759 - 9955976

26218

ENSAPLT00000036943

9929759 - 9955976

26218

ENSAPLT00000022342

9930363 - 9945049

14687

ENSAPLT00000033715

9930363 - 9950466

20104

ENSAPLT00000010483

9930363 - 9955976

25614

ENSAPLT00000029163

9929759 - 9946558

16800

ENSAPLT00000048057

9930363 - 9946558

16196