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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9942683_9943330_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9942683 - 9943330

Intron Length:

648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTAC

5'SS Class:

strong_major

3'SS Sequence:

GGTTTTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAA

U12 Branch Point Sequence:

AGAATCTTAACA

Flanking Amino Acid:

MQRDVLEQIQQFLATQLIMQ

Intron Amino Acid Position:

906

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.4

33.3

Major BPS

73.4

0.58

0.9

63.7

35.1

Major PPT

80.3

0.68

0.9

36.8

Minor 5ss

36.4

-1.5

3.4

49.2

47.3

Minor BPS

66.7

0.52

1.3

68.33

37.2

Associated Gene:

Gene:

BRD8

Ensembl Gene ID:

ENSAPLG00000009994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022342

9930363 - 9945049

14687

ENSAPLT00000033715

9930363 - 9950466

20104

ENSAPLT00000010483

9930363 - 9955976

25614

ENSAPLT00000029163

9929759 - 9946558

16800

ENSAPLT00000048057

9930363 - 9946558

16196

ENSAPLT00000026056

9929759 - 9955976

26218

ENSAPLT00000043015

9929759 - 9945283

15525

ENSAPLT00000025524

9929759 - 9955976

26218

ENSAPLT00000036943

9929759 - 9955976

26218