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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9943436_9945498_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9943436 - 9945498

Intron Length:

2063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAATG

5'SS Class:

strong_major

3'SS Sequence:

GCCTTGTGACTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTTCTGTTAATG

Flanking Amino Acid:

STRKQDASEKDGGTRGRRCA

Intron Amino Acid Position:

941

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

80.6

33.8

Major BPS

84.4

0.85

34.5

Major PPT

57.1

0.16

50.5

42.8

Minor 5ss

31.6

-2.1

39.4

46.1

Minor BPS

56.5

0.07

2.1

68.07

40.1

Associated Gene:

Gene:

BRD8

Ensembl Gene ID:

ENSAPLG00000009994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048057

9930363 - 9946558

16196