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Intron Name: Anas_platyrhynchos_platyrhynchos_14_9955801_9955870_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9955801 - 9955870

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CGGCCCCTGACG

Flanking Amino Acid:

AEIHQQGREGDRGAGRRHAA

Intron Amino Acid Position:

1347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.5

38.7

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

88.3

0.86

0.6

Minor 5ss

26.2

-2.7

2.9

22.7

37.4

Minor BPS

47.6

-0.3

1.8

49.79

43.9

Associated Gene:

Gene:

BRD8

Ensembl Gene ID:

ENSAPLG00000009994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026056

9929759 - 9955976

26218

ENSAPLT00000025524

9929759 - 9955976

26218

ENSAPLT00000010483

9930363 - 9955976

25614

ENSAPLT00000036943

9929759 - 9955976

26218