Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_9985267_9985339_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9985267 - 9985339

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGCCA

5'SS Class:

major

3'SS Sequence:

CGCTCTCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGGCAC

U12 Branch Point Sequence:

TGCTCCGGCACC

Flanking Amino Acid:

VLSSAFQLAGGKVAGDIFKD

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

63.4

42.7

Major BPS

40.2

-0.6

1.3

40.4

Major PPT

74.2

0.54

0.8

67.6

32.4

Minor 5ss

-2.3

3.4

39.7

45.8

Minor BPS

44.1

-0.4

2.5

59.68

45.2

Associated Gene:

Gene:

SLC34A1

Ensembl Gene ID:

ENSAPLG00000011205

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011694

9984756 - 9988140

3385