Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_9985985_9986130_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9985985 - 9986130

Intron Length:

146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTCCGCG

5'SS Class:

weak_major

3'SS Sequence:

CGTGTTGTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAA

U12 Branch Point Sequence:

CAGCCCCCAACC

Flanking Amino Acid:

TEPFTKLIIQLDKSVITGIA

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.7

0.02

1.4

44.2

43.8

Major BPS

45.3

-0.2

1.2

35.2

Major PPT

75.3

0.57

68.6

Minor 5ss

43.7

-0.7

57.1

47.1

Minor BPS

46.4

-0.2

1.9

54.44

42.9

Associated Gene:

Gene:

SLC34A1

Ensembl Gene ID:

ENSAPLG00000011205

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011694

9984756 - 9988140

3385