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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1003360_1004463_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1003360 - 1004463

Intron Length:

1104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

ACTGGCTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

AGATTTATACCT

Flanking Amino Acid:

ASENSSNDNKCTTDTKRNSK

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.9

31.3

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

69.3

0.43

0.9

62.2

39.2

Minor 5ss

37.8

-1.4

3.3

55.2

42.1

Minor BPS

47.2

-0.1

1.8

64.4

39.9

Associated Gene:

Gene:

SLC5A11

Ensembl Gene ID:

ENSAPLG00000009559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028523

1003142 - 1015514

12373

ENSAPLT00000028248

1002142 - 1014286

12145

ENSAPLT00000009962

1003142 - 1014286

11145