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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1004627_1005841_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1004627 - 1005841

Intron Length:

1215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGCGTCAA

5'SS Class:

major

3'SS Sequence:

TTCATGCCATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTTCTTTAACA

Flanking Amino Acid:

MLTEPPSEEMISRLTWFTRG

Intron Amino Acid Position:

530

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

63.1

38.7

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

69.3

0.43

67.1

39.1

Minor 5ss

27.2

-2.6

2.9

28.5

38.4

Minor BPS

92.1

1.32

0.7

95.26

19.9

Associated Gene:

Gene:

SLC5A11

Ensembl Gene ID:

ENSAPLG00000009559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009962

1003142 - 1014286

11145

ENSAPLT00000029262

1003934 - 1015514

11581

ENSAPLT00000028523

1003142 - 1015514

12373

ENSAPLT00000028248

1002142 - 1014286

12145