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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1008325_1008786_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1008325 - 1008786

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTAATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CATTTCTTAATT

Flanking Amino Acid:

PSLWYWCTDQVIVQRSLAAK

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

74.5

32.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

80.2

0.68

0.8

35.1

Minor 5ss

33.7

-1.9

3.1

42.4

45.1

Minor BPS

78.1

0.96

1.1

84.43

36.6

Associated Gene:

Gene:

SLC5A11

Ensembl Gene ID:

ENSAPLG00000009559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028523

1003142 - 1015514

12373

ENSAPLT00000028248

1002142 - 1014286

12145

ENSAPLT00000009962

1003142 - 1014286

11145

ENSAPLT00000029262

1003934 - 1015514

11581