Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_1011834_1012489_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1011834 - 1012489

Intron Length:

656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTGTG

5'SS Class:

major

3'SS Sequence:

TTCTCCCGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

GCTCCCGTATCT

Flanking Amino Acid:

GIAATAYEWNVTTMPEYLQK

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.3

72.2

39.5

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

73.5

0.53

0.9

68.4

Minor 5ss

32.2

-2

3.3

39.4

39.8

Minor BPS

48.3

-0

2.3

70.06

46.4

Associated Gene:

Gene:

SLC5A11

Ensembl Gene ID:

ENSAPLG00000009559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009962

1003142 - 1014286

11145