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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1012178_1012489_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1012178 - 1012489

Intron Length:

312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTGTG

5'SS Class:

major

3'SS Sequence:

ATTTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CATCCTTGAATT

Flanking Amino Acid:

GIAATAYEWNGMFCVLVLAW

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.3

72.2

39.5

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

86.6

0.82

0.8

81.1

35.9

Minor 5ss

32.2

-2

3.3

39.4

39.8

Minor BPS

59.3

0.37

1.4

71.43

39.7

Associated Gene:

Gene:

SLC5A11

Ensembl Gene ID:

ENSAPLG00000009559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028523

1003142 - 1015514

12373

ENSAPLT00000028248

1002142 - 1014286

12145

ENSAPLT00000029262

1003934 - 1015514

11581